EnhancerDB
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  3. rs116143205[chr12:48201901]
Enhancers that have rs116143205[chr12:48201901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48196110 48206535 enh14687
Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Thymus Heart
chr12 48201899 48202220 vista13294
VISTA
Transcript factors that have rs116143205[chr12:48201901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48201635 48202295 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029040
chr12 48201698 48202382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029041
chr12 48201716 48202236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029042
chr12 48201741 48202141 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029043
chr12 48201767 48202363 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029044
chr12 48201803 48202213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029045
chr12 48201818 48202254 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029046
chr12 48201833 48202129 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029047
chr12 48201839 48202143 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029048
chr12 48201840 48202056 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029049
chr12 48201849 48202239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029050
chr12 48201876 48201992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029051
chr12 48201876 48202240 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029052
chr12 48201887 48202323 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029053
chr12 48201889 48201910 ZNF263 JASPAR yes 82398763
chr12 48201889 48201910 ZNF263 JASPAR yes 120718466
chr12 48201896 48202154 RUNX3 UCSC Txn Factor no Conserved 108029054
chr12 48201896 48202154 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029055
Genes associated with rs116143205[chr12:48201901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More