EnhancerDB
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  3. rs116186896[chr1:42683553]
Enhancers that have rs116186896[chr1:42683553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42666765 42684795 enh11799
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Liver Bone (Osteoblast) Placenta Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116186896[chr1:42683553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42683538 42683554 SOX8 JASPAR yes 28449667
chr1 42683550 42683561 HOXC11 JASPAR yes 28449668
chr1 42683550 42683561 HOXC12 JASPAR yes 28449669
chr1 42683551 42683561 HOXD11 JASPAR yes 28449670
chr1 42683553 42683568 FOXP1 JASPAR yes 28449671
Genes associated with rs116186896[chr1:42683553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More