EnhancerDB
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  3. rs116235429[chr16:88565828]
Enhancers that have rs116235429[chr16:88565828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs116235429[chr16:88565828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88565820 88565835 ZIC3 JASPAR yes 12291394
chr16 88565820 88565835 ZIC4 JASPAR yes 12291395
chr16 88565821 88565835 ZIC1 JASPAR yes 12291396
chr16 88565827 88565838 E2F6 JASPAR yes 12291397
chr16 88565827 88565840 SMAD2 JASPAR yes 12291398
chr16 88565828 88565833 SP1 TRANSFAC yes 12291399
Genes associated with rs116235429[chr16:88565828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More