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- rs116259856[chr17:62679007]
Enhancers that have rs116259856[chr17:62679007]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
62671385 |
62687563 |
enh17299 |
|
|
Transcript factors that have rs116259856[chr17:62679007]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
62678110
|
62679222
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21778910
|
|
|
chr17
|
62678173
|
62679223
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21778911
|
|
|
chr17
|
62679001
|
62679019
|
NFYA
|
JASPAR
|
yes
|
|
55310956
|
|
|
chr17
|
62679004
|
62679020
|
NFYA
|
JASPAR
|
yes
|
|
55310957
|
|
|
chr17
|
62679004
|
62679022
|
RARA
|
JASPAR
|
yes
|
|
55310958
|
|
|
chr17
|
62679005
|
62679275
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21778915
|
|
|
chr17
|
62679007
|
62679020
|
DUXA
|
JASPAR
|
yes
|
|
55310959
|
|
|
chr17
|
62679007
|
62679022
|
NFYB
|
JASPAR
|
yes
|
|
55310960
|
|
Genes associated with rs116259856[chr17:62679007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |