EnhancerDB
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  3. rs116278421[chr17:77892529]
Enhancers that have rs116278421[chr17:77892529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs116278421[chr17:77892529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77891515 77893193 TCF7L2 GTRD no Colon (HCT116) 21796626
chr17 77891615 77893216 TCF7L2 GTRD no Colon (HCT116) 21796627
chr17 77891619 77892625 TCF7L2 GTRD no Colon (HCT116) 21796628
chr17 77891692 77892536 ZNF274 GTRD no Liver (HepG2) 21796630
chr17 77891736 77893169 TCF7L2 GTRD no Colon (HCT116) 21796631
chr17 77891991 77892952 ZNF274 GTRD no Cervix (HeLa-S3) 21796632
chr17 77892022 77893148 ZNF143 GTRD no Epithelial (MCF-7) 21796633
chr17 77892037 77893251 ZNF143 GTRD no Epithelial (MCF-7) 21796634
chr17 77892067 77893076 ZNF143 GTRD no Epithelial (MCF-7) 21796635
chr17 77892068 77893161 ZNF143 GTRD no Epithelial (MCF-7) 21796636
chr17 77892084 77892983 ZNF274 GTRD no Liver (HepG2) 21796637
chr17 77892125 77893074 ZNF143 GTRD no Epithelial (MCF-7) 21796638
chr17 77892127 77892736 ZNF274 GTRD no Blood (GM12878) 21796639
chr17 77892169 77892946 ZNF274 GTRD no Blood (GM12878) 21796640
chr17 77892193 77892871 ZNF143 GTRD no Epithelial (MCF-7) 21796641
chr17 77892209 77892946 ZNF274 GTRD no Blood (GM12878) 21796642
chr17 77892212 77892959 ZNF274 GTRD no Liver (HepG2) 21796643
chr17 77892220 77892862 ZNF274 GTRD no Blood (GM12878) 21796644
chr17 77892228 77892936 ZNF143 GTRD no Epithelial (MCF-7) 21796645
chr17 77892255 77892888 ZNF143 GTRD no Epithelial (MCF-7) 21796646
chr17 77892270 77893145 ZNF143 GTRD no Epithelial (MCF-7) 21796647
chr17 77892297 77892839 ZNF274 GTRD no Liver (HepG2) 21796648
chr17 77892299 77892767 ZNF274 GTRD no Cervix (HeLa-S3) 21796649
chr17 77892309 77892770 ZNF274 GTRD no Cervix (HeLa-S3) 21796650
chr17 77892352 77892755 ZNF274 GTRD no Liver (HepG2) 21796651
chr17 77892360 77892769 ZNF274 GTRD no Blood (GM12878) 21796652
chr17 77892373 77892758 ZNF143 GTRD no Epithelial (MCF-7) 21796653
chr17 77892403 77892735 ZNF274 GTRD no Blood (GM12878) 21796654
chr17 77892491 77892873 ZNF274 GTRD no Blood (GM12878) 21796655
chr17 77892527 77892540 SCRT2 JASPAR yes 56228694
Genes associated with rs116278421[chr17:77892529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More