EnhancerDB
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  3. rs116279932[chr17:38267398]
Enhancers that have rs116279932[chr17:38267398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38259185 38273195 enh4407
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116279932[chr17:38267398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38266954 38267786 ZNF143 GTRD no Epithelial (MCF-7) 21753265
chr17 38267020 38267662 ZNF143 GTRD no Epithelial (MCF-7) 21753266
chr17 38267045 38267648 ZNF143 GTRD no Epithelial (MCF-7) 21753267
chr17 38267316 38267760 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21753268
chr17 38267387 38267401 POU1F1 JASPAR yes 54193943
chr17 38267388 38267400 POU3F1 JASPAR yes 54193944
chr17 38267388 38267400 POU3F2 JASPAR yes 54193945
chr17 38267388 38267401 POU3F3 JASPAR yes 54193946
chr17 38267395 38267399 YY1 TRANSFAC yes 54193947
Genes associated with rs116279932[chr17:38267398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More