EnhancerDB
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  3. rs116293919[chr1:42093608]
Enhancers that have rs116293919[chr1:42093608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs116293919[chr1:42093608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42093602 42093611 PITX3 JASPAR yes 28403241
chr1 42093602 42093612 GSC2 JASPAR yes 28403242
chr1 42093602 42093612 GSC JASPAR yes 28403243
chr1 42093603 42093611 OTX1 JASPAR yes 28403244
chr1 42093607 42093613 MZF1 JASPAR yes 28403245
Genes associated with rs116293919[chr1:42093608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More