EnhancerDB
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  3. rs116334090[chr1:15682589]
Enhancers that have rs116334090[chr1:15682589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15661425 15684075 enh26552
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs116334090[chr1:15682589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15682579 15682589 HOXC10 JASPAR yes 26981876
chr1 15682579 15682589 HOXD11 JASPAR yes 26981877
chr1 15682579 15682590 HOXA10 JASPAR yes 26981878
chr1 15682579 15682590 HOXC11 JASPAR yes 26981879
chr1 15682579 15682590 HOXC12 JASPAR yes 26981880
chr1 15682579 15682590 HOXD12 JASPAR yes 26981881
chr1 15682580 15682589 CDX1 JASPAR yes 26981882
chr1 15682580 15682591 CDX2 JASPAR yes 26981883
Genes associated with rs116334090[chr1:15682589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More