EnhancerDB
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  3. rs116351509[chr19:6540152]
Enhancers that have rs116351509[chr19:6540152]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6535385 6540520 enh4986
Prostate (PC-3) Cervix (HeLa-S3) Blood (OCI-LY7) Peripheral Blood (MM.1S) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr19 6539979 6540238 vista28439
VISTA
Transcript factors that have rs116351509[chr19:6540152]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6533744 6540314 POLR2A UCSC Txn Factor no Conserved 108378505
chr19 6538551 6541544 ZNF274 GTRD no Blood (GM12878) 108378506
chr19 6538577 6540224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108378508
chr19 6538581 6541780 ZNF274 GTRD no Blood (GM12878) 108378509
chr19 6538590 6540375 ZNF274 GTRD no Blood (GM12878) 108378510
chr19 6538591 6541762 ZNF274 GTRD no Blood (GM12878) 108378512
chr19 6538970 6540366 ZNF274 GTRD no Blood (GM12878) 108378513
chr19 6539364 6540152 ZNF274 GTRD no Blood (GM12878) 108378516
chr19 6539710 6540314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845638
chr19 6539710 6540314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108378518
chr19 6540149 6540153 H1TF2 TRANSFAC yes 70794788
chr19 6540149 6540153 NFE TRANSFAC yes 70794789
chr19 6540149 6540153 SRF TRANSFAC yes 70794790
chr19 6540149 6540153 H1TF2 TRANSFAC yes 112274298
chr19 6540149 6540153 NFE TRANSFAC yes 112274299
chr19 6540149 6540153 SRF TRANSFAC yes 112274300
Genes associated with rs116351509[chr19:6540152], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More