EnhancerDB
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  3. rs116373420[chr1:40852844]
Enhancers that have rs116373420[chr1:40852844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40843025 40858135 enh273
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs116373420[chr1:40852844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40852834 40852848 GATA2 JASPAR yes 28327435
chr1 40852838 40852846 GATA5 JASPAR yes 28327436
Genes associated with rs116373420[chr1:40852844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More