-
Home
- SNP
- rs116396073[chr12:50325204]
Enhancers that have rs116396073[chr12:50325204]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
50322803 |
50339035 |
enh2341 |
|
|
| chr12 |
50324888 |
50325278 |
vista13363 |
|
|
Transcript factors that have rs116396073[chr12:50325204]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
50324465
|
50325328
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030946
|
|
|
chr12
|
50324498
|
50325353
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030947
|
|
|
chr12
|
50324501
|
50325589
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030948
|
|
|
chr12
|
50324504
|
50325477
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030949
|
|
|
chr12
|
50324520
|
50325460
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030950
|
|
|
chr12
|
50324550
|
50325370
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030951
|
|
|
chr12
|
50324585
|
50325244
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030952
|
|
|
chr12
|
50324601
|
50325325
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030954
|
|
|
chr12
|
50324622
|
50325223
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030955
|
|
|
chr12
|
50324648
|
50325224
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030957
|
|
|
chr12
|
50324654
|
50325595
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030958
|
|
|
chr12
|
50324686
|
50325604
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030960
|
|
|
chr12
|
50324695
|
50325243
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030962
|
|
|
chr12
|
50324697
|
50325552
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030963
|
|
|
chr12
|
50324728
|
50325376
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030967
|
|
|
chr12
|
50324781
|
50325330
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030974
|
|
|
chr12
|
50324782
|
50325241
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030975
|
|
|
chr12
|
50324783
|
50325533
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030976
|
|
|
chr12
|
50324815
|
50325361
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030977
|
|
|
chr12
|
50324886
|
50325267
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030980
|
|
|
chr12
|
50325201
|
50325212
|
USF1
|
JASPAR
|
yes
|
|
82401313
|
|
|
chr12
|
50325201
|
50325212
|
USF2
|
JASPAR
|
yes
|
|
82401314
|
|
|
chr12
|
50325201
|
50325212
|
USF1
|
JASPAR
|
yes
|
|
120807454
|
|
|
chr12
|
50325201
|
50325212
|
USF2
|
JASPAR
|
yes
|
|
120807455
|
|
|
chr12
|
50325202
|
50325212
|
TFEB
|
JASPAR
|
yes
|
|
82401315
|
|
|
chr12
|
50325202
|
50325212
|
TFEC
|
JASPAR
|
yes
|
|
82401316
|
|
|
chr12
|
50325202
|
50325212
|
TFEB
|
JASPAR
|
yes
|
|
120807456
|
|
|
chr12
|
50325202
|
50325212
|
TFEC
|
JASPAR
|
yes
|
|
120807457
|
|
Genes associated with rs116396073[chr12:50325204], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
51157493
|
51214905
|
+
|
ATF1
|
ENSG00000123268.4
|
51157493
|
832289
|
Ovary
|
0.811554
|
12054
|
|