EnhancerDB
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  3. rs116396088[chr1:54715326]
Enhancers that have rs116396088[chr1:54715326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54709082 54722240 enh42965
Prostate (PC-3) Brain (SK-N-SH) Bone (Osteoblast) Stomach Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs116396088[chr1:54715326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54714692 54716443 ZNF274 GTRD no Blood (GM12878) 107804418
chr1 54714798 54716707 ZNF274 GTRD no Blood (GM12878) 107804419
chr1 54714815 54717152 ZNF274 GTRD no Blood (GM12878) 107804420
chr1 54714885 54716758 ZNF274 GTRD no Cervix (HeLa-S3) 107804421
chr1 54714893 54716289 TCF7L2 GTRD no Colon (HCT116) 107804422
chr1 54714954 54717414 ZNF274 GTRD no Bone Marrow (K562) 107804423
chr1 54714956 54716293 ZNF274 GTRD no Bone Marrow (K562) 107804424
chr1 54714966 54716441 ZNF274 GTRD no Bone Marrow (K562) 107804425
chr1 54714995 54716785 ZNF274 GTRD no Bone Marrow (K562) 107804426
chr1 54715066 54716369 ZNF274 GTRD no Bone Marrow (K562) 107804427
chr1 54715077 54716926 ZNF274 GTRD no Bone Marrow (K562) 107804428
chr1 54715102 54716727 ZNF274 GTRD no Liver (HepG2) 107804429
chr1 54715123 54716582 ZNF274 GTRD no Liver (HepG2) 107804430
chr1 54715135 54716499 ZNF274 GTRD no Liver (HepG2) 107804431
chr1 54715135 54716555 ZBTB33 GTRD no Lung (A549) 107804432
chr1 54715137 54716078 ZNF274 GTRD no Bone Marrow (K562) 107804433
chr1 54715146 54717255 ZNF274 GTRD no Bone Marrow (K562) 107804434
chr1 54715147 54716653 ZNF143 GTRD no Epithelial (MCF-7) 107804435
chr1 54715155 54716492 TCF7L2 GTRD no Colon (HCT116) 107804436
chr1 54715185 54717198 ZNF274 GTRD no Bone Marrow (K562) 107804437
chr1 54715196 54716413 ZNF274 GTRD no Liver (HepG2) 107804438
chr1 54715201 54716938 ZNF274 GTRD no Bone Marrow (K562) 107804439
chr1 54715203 54716432 ZNF274 GTRD no Bone Marrow (K562) 107804440
chr1 54715206 54716407 ZNF274 GTRD no Liver (HepG2) 107804441
chr1 54715206 54717032 ZNF274 GTRD no Bone Marrow (K562) 107804442
chr1 54715207 54716638 ZNF274 GTRD no Bone Marrow (K562) 107804443
chr1 54715207 54716704 ZNF274 GTRD no Liver (HepG2) 107804444
chr1 54715209 54717207 ZNF274 GTRD no Blood (GM12878) 107804445
chr1 54715217 54716933 ZNF274 GTRD no Bone Marrow (K562) 107804446
chr1 54715218 54716744 ZBTB33 GTRD no Lung (A549) 107804447
chr1 54715224 54716538 ZNF274 GTRD no Bone Marrow (K562) 107804448
chr1 54715231 54716926 ZNF274 GTRD no Bone Marrow (K562) 107804449
chr1 54715233 54716726 ZNF274 GTRD no Blood (GM12878) 107804450
chr1 54715239 54716025 ZNF274 GTRD no Bone Marrow (K562) 107804451
chr1 54715251 54716373 ZNF143 GTRD no Epithelial (MCF-7) 107804452
chr1 54715255 54716110 ZNF274 GTRD no Liver (HepG2) 107804453
chr1 54715257 54716052 ZNF274 GTRD no Bone Marrow (K562) 107804454
chr1 54715259 54716590 ZNF143 GTRD no Epithelial (MCF-7) 107804455
chr1 54715267 54716518 ZNF274 GTRD no Bone Marrow (K562) 107804456
chr1 54715271 54716361 ZBTB33 GTRD no Lung (A549) 107804457
chr1 54715272 54716535 ZNF274 GTRD no Blood (GM12878) 107804458
chr1 54715273 54716423 ZNF274 GTRD no Bone Marrow (K562) 107804459
chr1 54715279 54716252 ZNF274 GTRD no Blood (GM12878) 107804460
chr1 54715288 54716735 ZBTB33 GTRD no Lung (A549) 107804461
chr1 54715293 54716267 ZNF274 GTRD no Liver (HepG2) 107804462
chr1 54715312 54716581 ZNF274 GTRD no Liver (HepG2) 107804463
chr1 54715315 54716456 ZNF274 GTRD no Liver (HepG2) 107804464
chr1 54715323 54716336 ZNF274 GTRD no Bone Marrow (K562) 107804465
chr1 54715324 54716491 TCF7L2 GTRD no Colon (HCT116) 107804466
Genes associated with rs116396088[chr1:54715326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More