EnhancerDB
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  3. rs116397279[chr16:19407022]
Enhancers that have rs116397279[chr16:19407022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19385025 19410955 enh16592
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs116397279[chr16:19407022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19406743 19407104 ZNF143 GTRD no Epithelial (MCF-7) 21695561
chr16 19406824 19407437 ZNF274 GTRD no Cervix (HeLa-S3) 21695562
chr16 19406848 19407586 ZNF274 GTRD no Cervix (HeLa-S3) 21695563
chr16 19406863 19407765 ZNF274 GTRD no Cervix (HeLa-S3) 21695564
chr16 19406867 19407383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21695565
chr16 19406889 19407293 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21695566
chr16 19406955 19407305 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21695567
chr16 19406976 19407283 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21695568
chr16 19407018 19407298 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21695569
chr16 19407022 19407028 LEF1 TRANSFAC yes 9866453
chr16 19407022 19407028 SOX10 JASPAR yes 9866454
chr16 19407022 19407037 FOXP1 JASPAR yes 9866455
Genes associated with rs116397279[chr16:19407022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More