EnhancerDB
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  3. rs116400421[chr12:109011807]
Enhancers that have rs116400421[chr12:109011807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116400421[chr12:109011807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109011264 109011854 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571037
chr12 109011264 109011854 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056923
chr12 109011806 109011816 CUX1 JASPAR yes 123607439
chr12 109011806 109011816 CUX2 JASPAR yes 123607440
Genes associated with rs116400421[chr12:109011807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More