EnhancerDB
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  3. rs116400643[chr2:204664617]
Enhancers that have rs116400643[chr2:204664617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204660585 204687955 enh19133
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Stomach
Transcript factors that have rs116400643[chr2:204664617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204664607 204665035 RELA UCSC Txn Factor no Conserved 108434924
chr2 204664608 204664618 RELA JASPAR yes 80266381
chr2 204664612 204664627 FOXP1 JASPAR yes 80266382
chr2 204664615 204664627 FOXI1 JASPAR yes 80266383
chr2 204664617 204664628 FOXA1 JASPAR yes 80266384
chr2 204664617 204664632 FOXA1 JASPAR yes 80266385
chr2 204664617 204664933 EBF1 UCSC Txn Factor no Conserved 108434925
Genes associated with rs116400643[chr2:204664617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More