EnhancerDB
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  3. rs116402572[chr1:116854469]
Enhancers that have rs116402572[chr1:116854469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116402572[chr1:116854469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116852038 116854512 ZNF143 GTRD no Epithelial (MCF-7) 21331955
chr1 116852222 116855719 ZNF143 GTRD no Epithelial (MCF-7) 21331958
chr1 116852458 116856181 ZNF274 GTRD no Cervix (HeLa-S3) 21331960
chr1 116852657 116856456 ZNF143 GTRD no Epithelial (MCF-7) 21331961
chr1 116852689 116854789 ZNF143 GTRD no Epithelial (MCF-7) 21331964
chr1 116852789 116856632 ZNF143 GTRD no Epithelial (MCF-7) 21331966
chr1 116852879 116854621 ZNF274 GTRD no Bone Marrow (K562) 21331968
chr1 116853106 116854528 ZNF143 GTRD no Epithelial (MCF-7) 21331972
chr1 116853315 116854567 ZNF143 GTRD no Epithelial (MCF-7) 21331975
chr1 116853394 116854672 ZNF143 GTRD no Epithelial (MCF-7) 21331978
chr1 116853448 116854783 ZNF274 GTRD no Bone Marrow (K562) 21331982
chr1 116853472 116854536 ZNF143 GTRD no Epithelial (MCF-7) 21331986
chr1 116853490 116854715 ZNF143 GTRD no Epithelial (MCF-7) 21331987
chr1 116853561 116854475 ZNF143 GTRD no Epithelial (MCF-7) 21331998
chr1 116853706 116856589 ZNF143 GTRD no Epithelial (MCF-7) 21332039
chr1 116853853 116854961 ZNF143 GTRD no Epithelial (MCF-7) 21332049
chr1 116854014 116854702 ZNF274 GTRD no Cervix (HeLa-S3) 21332050
chr1 116854209 116854658 ZNF274 GTRD no Bone Marrow (K562) 21332051
chr1 116854258 116854622 ZNF143 GTRD no Epithelial (MCF-7) 21332052
chr1 116854291 116854662 ZNF274 GTRD no Bone Marrow (K562) 21332053
chr1 116854318 116854605 ZNF274 GTRD no Cervix (HeLa-S3) 21332054
chr1 116854365 116854565 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332055
chr1 116854398 116854551 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332056
chr1 116854403 116854546 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332057
chr1 116854405 116855061 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332058
chr1 116854440 116854936 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332059
chr1 116854461 116854475 CREB3L1 JASPAR yes 31792885
chr1 116854462 116854472 MAX JASPAR yes 31792886
chr1 116854462 116854473 USF1 JASPAR yes 31792887
chr1 116854462 116854473 USF2 JASPAR yes 31792888
chr1 116854462 116854474 HES5 JASPAR yes 31792889
chr1 116854463 116854473 HEY1 JASPAR yes 31792890
chr1 116854463 116854473 HEY2 JASPAR yes 31792891
chr1 116854463 116854473 MAX JASPAR yes 31792892
chr1 116854463 116854473 MNT JASPAR yes 31792893
chr1 116854463 116854473 TFE3 JASPAR yes 31792894
chr1 116854463 116854473 TFEB JASPAR yes 31792895
chr1 116854463 116854474 USF1 JASPAR yes 31792896
chr1 116854463 116854474 USF2 JASPAR yes 31792897
chr1 116854464 116854471 USF1 JASPAR yes 31792898
chr1 116854464 116854474 MAX JASPAR yes 31792899
chr1 116854465 116854470 MYC TRANSFAC yes 31792900
chr1 116854465 116854470 USF1 TRANSFAC yes 31792901
chr1 116854465 116854470 USF2 TRANSFAC yes 31792902
chr1 116854465 116854472 USF1 JASPAR yes 31792903
Genes associated with rs116402572[chr1:116854469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More