EnhancerDB
  1. Home
  2. SNP
  3. rs116421858[chr1:200253531]
Enhancers that have rs116421858[chr1:200253531]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs116421858[chr1:200253531]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200253369 200253713 ZNF143 GTRD no Epithelial (MCF-7) 21362705
chr1 200253457 200254359 ZNF143 GTRD no Epithelial (MCF-7) 21362706
chr1 200253459 200255000 ZNF274 GTRD no Blood (GM12878) 21362707
chr1 200253519 200253531 TEAD1 JASPAR yes 34428593
Genes associated with rs116421858[chr1:200253531], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More