EnhancerDB
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  3. rs116428447[chr1:22734488]
Enhancers that have rs116428447[chr1:22734488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22732968 22749372 enh11600
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs116428447[chr1:22734488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22733137 22736301 TCF7L2 GTRD no Colon (HCT116) 21325280
chr1 22734480 22734491 FOXB1 JASPAR yes 27370804
chr1 22734480 22734491 FOXC1 JASPAR yes 27370805
chr1 22734480 22734493 NR2F1 JASPAR yes 27370806
chr1 22734482 22734493 ESRRA JASPAR yes 27370807
chr1 22734482 22734493 ESRRB JASPAR yes 27370808
chr1 22734483 22734491 NR4A2 JASPAR yes 27370809
chr1 22734483 22734498 HNF4A JASPAR yes 27370810
chr1 22734484 22734494 RORA JASPAR yes 27370811
chr1 22734484 22734498 RXRG JASPAR yes 27370812
chr1 22734484 22734499 HNF4G JASPAR yes 27370813
chr1 22734488 22734494 SOX10 JASPAR yes 27370814
Genes associated with rs116428447[chr1:22734488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More