EnhancerDB
  1. Home
  2. SNP
  3. rs116456390[chr6:43772225]
Enhancers that have rs116456390[chr6:43772225]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116456390[chr6:43772225]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43772217 43772227 SP1 JASPAR yes 101786640
chr6 43772220 43772225 SP1 TRANSFAC yes 101786641
chr6 43772222 43772227 TFAP2A TRANSFAC yes 101786642
chr6 43772222 43772228 MZF1 JASPAR yes 101786643
Genes associated with rs116456390[chr6:43772225], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More