EnhancerDB
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  3. rs116474381[chr1:42149942]
Enhancers that have rs116474381[chr1:42149942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116474381[chr1:42149942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42149677 42150041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802967
chr1 42149941 42149955 CREB3L1 JASPAR yes 28409877
chr1 42149941 42149955 CREB3L1 JASPAR yes 118279340
chr1 42149942 42149952 RORA JASPAR yes 28409878
chr1 42149942 42149952 RORA JASPAR yes 118279341
Genes associated with rs116474381[chr1:42149942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More