EnhancerDB
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  3. rs116475146[chr1:201988089]
Enhancers that have rs116475146[chr1:201988089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201984945 201995087 enh12532
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver Placenta Colon (HCT116) Lung (PC-9) Stomach
chr1 201987611 201988279 vista4586
VISTA
Transcript factors that have rs116475146[chr1:201988089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201986751 201988461 POLR2A UCSC Txn Factor no Conserved 107857226
chr1 201986892 201988312 TCF12 UCSC Txn Factor no Conserved 107857227
chr1 201987429 201988312 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857231
chr1 201987484 201988379 EP300 UCSC Txn Factor no Conserved 107857235
chr1 201987484 201988379 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857236
chr1 201987498 201988222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857237
chr1 201987612 201988182 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857264
chr1 201987634 201988174 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857267
chr1 201987634 201988188 E2F1 UCSC Txn Factor no Conserved 107857268
chr1 201987634 201988188 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857269
chr1 201987634 201988329 GATA3 UCSC Txn Factor no Conserved 107857270
chr1 201987684 201988120 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857279
chr1 201987684 201988228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857280
chr1 201987685 201988205 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857281
chr1 201987686 201988236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365401
chr1 201987686 201988236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857282
chr1 201987688 201988164 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365402
chr1 201987688 201988164 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857283
chr1 201987696 201988246 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857284
chr1 201987709 201988249 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857286
chr1 201987727 201988197 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857288
chr1 201987728 201988258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365404
chr1 201987728 201988258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857289
chr1 201987732 201988280 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857290
chr1 201987739 201988223 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857291
chr1 201987740 201988224 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857292
chr1 201987756 201988112 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857293
chr1 201987768 201988224 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365405
chr1 201987768 201988224 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857294
chr1 201987777 201988233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857295
chr1 201987785 201988161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365406
chr1 201987785 201988161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857298
chr1 201987788 201988292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365407
chr1 201987788 201988292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857299
chr1 201987791 201988111 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365408
chr1 201987791 201988111 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857300
chr1 201987794 201988290 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857301
chr1 201987806 201988162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365409
chr1 201987806 201988162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857302
chr1 201987807 201988107 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857303
chr1 201987813 201988153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365411
chr1 201987813 201988153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857305
chr1 201987822 201988146 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107857306
chr1 201987850 201988506 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857307
chr1 201987852 201988183 FOSL2 UCSC Txn Factor no Conserved 107857308
chr1 201987852 201988183 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857309
chr1 201987856 201988090 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857310
chr1 201987856 201988124 FOXA1 UCSC Txn Factor no Conserved 107857311
chr1 201987859 201988205 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857312
chr1 201987874 201988116 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857313
chr1 201987875 201988110 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857314
chr1 201987883 201988219 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857315
chr1 201987915 201988175 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857316
chr1 201987917 201988161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365412
chr1 201987917 201988161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857317
chr1 201987928 201988238 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857318
chr1 201987931 201988201 USF1 UCSC Txn Factor no Conserved 107857319
chr1 201987956 201988186 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857320
chr1 201987963 201988184 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857321
chr1 201988027 201988135 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857322
chr1 201988046 201988236 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857323
chr1 201988077 201988461 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857324
chr1 201988079 201988097 ESR2 JASPAR yes 34541884
chr1 201988079 201988097 ESR2 JASPAR yes 118433538
chr1 201988089 201988104 PRDM1 JASPAR yes 34541885
chr1 201988089 201988104 PRDM1 JASPAR yes 118433539
Genes associated with rs116475146[chr1:201988089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More