EnhancerDB
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  3. rs116485618[chr17:6571516]
Enhancers that have rs116485618[chr17:6571516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs116485618[chr17:6571516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6571507 6571518 EBF1 JASPAR yes 52923959
chr17 6571511 6571516 TFAP2A TRANSFAC yes 52923960
chr17 6571511 6571517 MZF1 JASPAR yes 52923961
Genes associated with rs116485618[chr17:6571516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More