EnhancerDB
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  3. rs116534152[chr1:220543848]
Enhancers that have rs116534152[chr1:220543848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs116534152[chr1:220543848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220543512 220544042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381691
chr1 220543560 220543916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381693
chr1 220543562 220544078 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381694
chr1 220543584 220544088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381695
chr1 220543625 220543995 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381696
chr1 220543631 220543987 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21381697
chr1 220543681 220544077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381698
chr1 220543715 220544045 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381699
chr1 220543729 220544133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381700
chr1 220543734 220544110 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381701
Genes associated with rs116534152[chr1:220543848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More