EnhancerDB
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Enhancers that have rs11654272[chr17:5430401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5427825 5432657 enh16952
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Kidney
chr17 5430157 5430402 vista23821
VISTA
Transcript factors that have rs11654272[chr17:5430401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5430030 5430606 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108233142
chr17 5430052 5430448 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233143
chr17 5430090 5430430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740615
chr17 5430090 5430430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233144
chr17 5430090 5430462 JUN UCSC Txn Factor no Conserved 108233145
chr17 5430105 5430425 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740616
chr17 5430105 5430425 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233146
chr17 5430131 5430412 JUND UCSC Txn Factor no Conserved 108233149
chr17 5430131 5430412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233150
chr17 5430141 5430411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233152
chr17 5430141 5430471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740618
chr17 5430141 5430471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233153
chr17 5430150 5430546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740619
chr17 5430150 5430546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233154
chr17 5430155 5430411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233155
chr17 5430164 5430408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233157
chr17 5430168 5430412 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21740621
chr17 5430168 5430412 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108233160
chr17 5430168 5430458 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108233161
chr17 5430204 5430464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740622
chr17 5430204 5430464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233164
chr17 5430299 5434571 ZBTB33 GTRD no Lung (A549) 108233168
chr17 5430308 5432762 ZNF274 GTRD no Blood (GM12878) 108233169
chr17 5430316 5434505 ZNF274 GTRD no Blood (GM12878) 108233170
chr17 5430388 5430403 TFAP2A JASPAR yes 21189384
chr17 5430388 5430403 TFAP2C JASPAR yes 21189385
chr17 5430388 5430403 TFAP2A JASPAR yes 52875580
chr17 5430388 5430403 TFAP2C JASPAR yes 52875581
chr17 5430391 5430402 EBF1 JASPAR yes 21189386
chr17 5430391 5430402 EBF1 JASPAR yes 52875582
chr17 5430392 5430401 TFAP2A JASPAR yes 21189387
chr17 5430392 5430401 TFAP2A JASPAR yes 52875583
chr17 5430399 5432592 ZBTB33 GTRD no Lung (A549) 108233171
chr17 5430400 5430405 NFY TRANSFAC yes 21189388
chr17 5430400 5430405 NFY TRANSFAC yes 52875584
Genes associated with rs11654272[chr17:5430401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More