EnhancerDB
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  3. rs11654410[chr17:5430091]
Enhancers that have rs11654410[chr17:5430091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5427825 5432657 enh16952
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Kidney
Transcript factors that have rs11654410[chr17:5430091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5430030 5430606 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108233142
chr17 5430052 5430448 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233143
chr17 5430087 5430108 IRF1 JASPAR yes 52875516
chr17 5430089 5430104 PRDM1 JASPAR yes 52875517
chr17 5430089 5430104 STAT2 JASPAR yes 52875518
chr17 5430090 5430104 STAT1 JASPAR yes 52875519
chr17 5430090 5430430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740615
chr17 5430090 5430430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233144
chr17 5430090 5430462 JUN UCSC Txn Factor no Conserved 108233145
chr17 5430091 5430103 IRF1 JASPAR yes 52875520
chr17 5430091 5430105 IRF7 JASPAR yes 52875521
Genes associated with rs11654410[chr17:5430091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More