EnhancerDB
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  3. rs116562561[chr1:42098746]
Enhancers that have rs116562561[chr1:42098746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs116562561[chr1:42098746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42098733 42098748 AR JASPAR yes 28403678
chr1 42098743 42098749 MZF1 JASPAR yes 28403680
chr1 42098744 42098758 PLAG1 JASPAR yes 28403681
Genes associated with rs116562561[chr1:42098746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More