EnhancerDB
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  3. rs116584556[chr2:29335533]
Enhancers that have rs116584556[chr2:29335533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 29326250 29340371 enh18402
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs116584556[chr2:29335533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 29335525 29335538 EOMES JASPAR yes 72689423
chr2 29335527 29335537 TBR1 JASPAR yes 72689424
chr2 29335527 29335538 TBX2 JASPAR yes 72689425
chr2 29335528 29335538 TBX21 JASPAR yes 72689426
chr2 29335529 29335537 MGA JASPAR yes 72689427
chr2 29335529 29335537 TBX15 JASPAR yes 72689428
chr2 29335529 29335537 TBX1 JASPAR yes 72689429
chr2 29335529 29335537 TBX4 JASPAR yes 72689430
chr2 29335529 29335537 TBX5 JASPAR yes 72689431
chr2 29335529 29335538 ZEB1 JASPAR yes 72689432
chr2 29335529 29335541 PKNOX1 JASPAR yes 72689433
chr2 29335529 29335541 TGIF1 JASPAR yes 72689434
chr2 29335530 29335540 FIGLA JASPAR yes 72689435
chr2 29335530 29335540 ID4 JASPAR yes 72689436
chr2 29335530 29335540 TCF3 JASPAR yes 72689437
chr2 29335530 29335540 TCF4 JASPAR yes 72689438
chr2 29335531 29335540 SNAI2 JASPAR yes 72689439
chr2 29335532 29335537 USF2 TRANSFAC yes 72689440
Genes associated with rs116584556[chr2:29335533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More