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- rs116585379[chr17:198398]
Enhancers that have rs116585379[chr17:198398]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
196245 |
201695 |
enh62575 |
|
|
Transcript factors that have rs116585379[chr17:198398]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
197325
|
198738
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108227568
|
|
|
chr17
|
197975
|
198991
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108227569
|
|
|
chr17
|
198058
|
198531
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108227570
|
|
|
chr17
|
198124
|
198670
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108227571
|
|
|
chr17
|
198369
|
198753
|
USF1
|
UCSC Txn Factor
|
no
|
Conserved
|
108227572
|
|
|
chr17
|
198369
|
198753
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108227573
|
|
|
chr17
|
198371
|
198855
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108227574
|
|
|
chr17
|
198387
|
198402
|
FOXP1
|
JASPAR
|
yes
|
|
52609999
|
|
|
chr17
|
198387
|
198408
|
IRF1
|
JASPAR
|
yes
|
|
52610000
|
|
|
chr17
|
198388
|
198399
|
FOXA1
|
JASPAR
|
yes
|
|
52610001
|
|
|
chr17
|
198389
|
198401
|
FOXC2
|
JASPAR
|
yes
|
|
52610002
|
|
|
chr17
|
198390
|
198401
|
FOXP2
|
JASPAR
|
yes
|
|
52610003
|
|
|
chr17
|
198390
|
198404
|
IRF7
|
JASPAR
|
yes
|
|
52610004
|
|
|
chr17
|
198390
|
198801
|
NR3C1
|
UCSC Txn Factor
|
no
|
Conserved
|
108227575
|
|
|
chr17
|
198392
|
198401
|
SRY
|
JASPAR
|
yes
|
|
52610005
|
|
|
chr17
|
198392
|
198404
|
IRF1
|
JASPAR
|
yes
|
|
52610006
|
|
|
chr17
|
198393
|
198408
|
MEF2C
|
JASPAR
|
yes
|
|
52610007
|
|
|
chr17
|
198394
|
198409
|
MEF2A
|
JASPAR
|
yes
|
|
52610008
|
|
|
chr17
|
198395
|
198407
|
MEF2A
|
JASPAR
|
yes
|
|
52610009
|
|
|
chr17
|
198395
|
198407
|
MEF2B
|
JASPAR
|
yes
|
|
52610010
|
|
|
chr17
|
198395
|
198407
|
MEF2D
|
JASPAR
|
yes
|
|
52610011
|
|
|
chr17
|
198396
|
198972
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108227576
|
|
|
chr17
|
198397
|
198933
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108227577
|
|
Genes associated with rs116585379[chr17:198398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |