EnhancerDB
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Enhancers that have rs116589580[chr12:120730568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120716965 120734448 enh2637
Prostate (PC-3) Prostate (RWPE1) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs116589580[chr12:120730568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120728066 120731416 POLR2A UCSC Txn Factor no Conserved 108063435
chr12 120730182 120730752 ZNF143 GTRD no Epithelial (MCF-7) 21578652
chr12 120730184 120730625 ZNF143 GTRD no Epithelial (MCF-7) 21578653
chr12 120730185 120730722 ZNF143 GTRD no Epithelial (MCF-7) 21578654
chr12 120730209 120730698 ZNF143 GTRD no Epithelial (MCF-7) 21578656
chr12 120730233 120730889 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21578657
chr12 120730286 120730609 ZNF143 GTRD no Epithelial (MCF-7) 21578658
chr12 120730364 120730580 ZNF143 GTRD no Epithelial (MCF-7) 21578659
chr12 120730430 120730714 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21578660
chr12 120730458 120731218 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21578661
chr12 120730476 120731256 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21578662
chr12 120730567 120730577 SREBF1 JASPAR yes 124164054
chr12 120730567 120730577 SREBF2 JASPAR yes 124164055
Genes associated with rs116589580[chr12:120730568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More