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- rs116597279[chr1:39516436]
Enhancers that have rs116597279[chr1:39516436]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
39508605 |
39516675 |
enh263 |
|
|
Transcript factors that have rs116597279[chr1:39516436]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
39516247
|
39516615
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107802885
|
|
|
chr1
|
39516432
|
39516443
|
SPDEF
|
JASPAR
|
yes
|
|
28249083
|
|
|
chr1
|
39516433
|
39516442
|
ELK4
|
JASPAR
|
yes
|
|
28249084
|
|
|
chr1
|
39516433
|
39516443
|
ELK1
|
JASPAR
|
yes
|
|
28249085
|
|
|
chr1
|
39516433
|
39516443
|
ELK3
|
JASPAR
|
yes
|
|
28249086
|
|
|
chr1
|
39516433
|
39516443
|
ERF
|
JASPAR
|
yes
|
|
28249087
|
|
|
chr1
|
39516433
|
39516443
|
ETV1
|
JASPAR
|
yes
|
|
28249088
|
|
Genes associated with rs116597279[chr1:39516436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |