EnhancerDB
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  3. rs116607617[chr1:52414109]
Enhancers that have rs116607617[chr1:52414109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52410065 52425504 enh361
Brain (SK-N-MC) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9)
Transcript factors that have rs116607617[chr1:52414109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52414096 52414111 TFAP2A JASPAR yes 28876651
chr1 52414099 52414111 TFAP2A JASPAR yes 28876652
chr1 52414099 52414111 TFAP2B JASPAR yes 28876653
chr1 52414099 52414111 TFAP2C JASPAR yes 28876654
chr1 52414109 52414123 SPI1 JASPAR yes 28876655
Genes associated with rs116607617[chr1:52414109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More