EnhancerDB
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  3. rs116616457[chr1:116862180]
Enhancers that have rs116616457[chr1:116862180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116616457[chr1:116862180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116862168 116862182 RXRB JASPAR yes 31794172
chr1 116862168 116862182 RXRG JASPAR yes 31794173
chr1 116862171 116862181 HOXB13 JASPAR yes 31794174
Genes associated with rs116616457[chr1:116862180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More