EnhancerDB
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  3. rs116639915[chr1:172921078]
Enhancers that have rs116639915[chr1:172921078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172914365 172932235 enh27246
Prostate (PC-3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube) Stomach
chr1 172920935 172921277 vista3931
VISTA
Transcript factors that have rs116639915[chr1:172921078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172921048 172921312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846507
chr1 172921048 172921329 CEBPB UCSC Txn Factor no Conserved 107846508
chr1 172921055 172921311 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846509
chr1 172921062 172921326 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846510
chr1 172921064 172921079 FOXP1 JASPAR yes 33170486
chr1 172921064 172921079 FOXP1 JASPAR yes 118400908
chr1 172921068 172921083 SCRT1 JASPAR yes 33170487
chr1 172921068 172921083 SCRT1 JASPAR yes 118400909
chr1 172921070 172921082 GRHL1 JASPAR yes 33170488
chr1 172921070 172921082 GRHL1 JASPAR yes 118400910
chr1 172921072 172921082 MSC JASPAR yes 33170489
chr1 172921072 172921082 MSC JASPAR yes 118400911
chr1 172921072 172921093 IRF1 JASPAR yes 33170490
chr1 172921072 172921093 IRF1 JASPAR yes 118400912
Genes associated with rs116639915[chr1:172921078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More