EnhancerDB
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  3. rs116672632[chr1:108073635]
Enhancers that have rs116672632[chr1:108073635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108065165 108083215 enh12108
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Breast Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs116672632[chr1:108073635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108072390 108074097 ZNF143 GTRD no Epithelial (MCF-7) 21326323
chr1 108073136 108074118 ZNF143 GTRD no Epithelial (MCF-7) 21326324
chr1 108073166 108073676 ZNF143 GTRD no Epithelial (MCF-7) 21326325
chr1 108073600 108073916 ZNF274 GTRD no Cervix (HeLa-S3) 21326326
chr1 108073622 108073637 FOXP1 JASPAR yes 31345814
chr1 108073625 108073635 HOXA13 JASPAR yes 31345815
chr1 108073625 108073635 HOXB13 JASPAR yes 31345816
chr1 108073625 108073635 HOXD13 JASPAR yes 31345817
chr1 108073625 108073636 HOXA10 JASPAR yes 31345818
chr1 108073626 108073635 CDX1 JASPAR yes 31345819
chr1 108073626 108073637 CDX2 JASPAR yes 31345820
chr1 108073630 108073642 FOXC2 JASPAR yes 31345821
chr1 108073630 108073643 HNF1B JASPAR yes 31345822
chr1 108073631 108073642 FOXC1 JASPAR yes 31345823
chr1 108073632 108073636 YY1 TRANSFAC yes 31345824
chr1 108073633 108073648 FOXP1 JASPAR yes 31345825
Genes associated with rs116672632[chr1:108073635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More