EnhancerDB
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  3. rs116712619[chr1:178653000]
Enhancers that have rs116712619[chr1:178653000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs116712619[chr1:178653000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178652502 178654034 TCF7L2 GTRD no Colon (HCT116) 21352922
chr1 178652563 178653952 TCF7L2 GTRD no Colon (HCT116) 21352923
chr1 178652668 178653622 AR GTRD no Prostate (PC-3) 21352924
chr1 178652880 178653313 MYOD GTRD no Muscle (Myoblast) 21352925
chr1 178652918 178653979 ZBTB33 GTRD no Lung (A549) 21352926
chr1 178652942 178653768 ZBTB33 GTRD no Lung (A549) 21352927
chr1 178652986 178653493 ZBTB33 GTRD no Lung (A549) 21352928
chr1 178652994 178653003 ZEB1 JASPAR yes 33438216
chr1 178652995 178653005 ID4 JASPAR yes 33438217
chr1 178652995 178653005 TCF3 JASPAR yes 33438218
chr1 178652995 178653005 TCF4 JASPAR yes 33438219
chr1 178652997 178653002 USF2 TRANSFAC yes 33438220
Genes associated with rs116712619[chr1:178653000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More