EnhancerDB
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  3. rs116728153[chr16:2890556]
Enhancers that have rs116728153[chr16:2890556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2883745 2901765 enh16505
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs116728153[chr16:2890556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2890190 2891765 ZNF274 GTRD no Cervix (HeLa-S3) 21685126
chr16 2890414 2891670 ZNF274 GTRD no Cervix (HeLa-S3) 21685127
chr16 2890488 2891342 ZNF274 GTRD no Cervix (HeLa-S3) 21685128
chr16 2890491 2891438 ZNF274 GTRD no Cervix (HeLa-S3) 21685129
chr16 2890498 2891489 ZNF143 GTRD no Epithelial (MCF-7) 21685130
chr16 2890550 2891157 ZNF274 GTRD no Bone Marrow (K562) 21685131
chr16 2890550 2891462 ZNF143 GTRD no Epithelial (MCF-7) 21685132
chr16 2890551 2891484 ZNF274 GTRD no Cervix (HeLa-S3) 21685133
chr16 2890556 2890560 LFA1 TRANSFAC yes 9192271
Genes associated with rs116728153[chr16:2890556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More