EnhancerDB
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  3. rs116746581[chr19:2065553]
Enhancers that have rs116746581[chr19:2065553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs116746581[chr19:2065553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2064092 2065668 TCF7L2 GTRD no Colon (HCT116) 21834639
chr19 2064092 2065668 TCF7L2 GTRD no Colon (HCT116) 108357505
chr19 2064108 2065792 ZNF274 GTRD no Cervix (HeLa-S3) 21834640
chr19 2064108 2065792 ZNF274 GTRD no Cervix (HeLa-S3) 108357506
chr19 2064229 2065801 ZNF274 GTRD no Liver (HepG2) 108357510
chr19 2064247 2065735 ZNF274 GTRD no Liver (HepG2) 108357511
chr19 2064381 2065562 ZNF274 GTRD no Liver (HepG2) 108357512
chr19 2064525 2065768 ZNF274 GTRD no Liver (HepG2) 108357516
chr19 2064627 2065572 ZNF143 GTRD no Epithelial (MCF-7) 108357518
chr19 2064653 2065689 ZNF274 GTRD no Blood (GM12878) 108357519
chr19 2064683 2065639 ZBTB33 GTRD no Lung (A549) 108357521
chr19 2064782 2065624 ZBTB33 GTRD no Lung (A549) 108357524
chr19 2064782 2065679 ZNF274 GTRD no Blood (GM12878) 108357525
chr19 2064823 2065819 AR GTRD no Prostate (PC-3) 21834647
chr19 2064823 2065819 AR GTRD no Prostate (PC-3) 108357527
chr19 2064911 2065677 ZNF274 GTRD no Blood (GM12878) 108357534
chr19 2064915 2065603 ZBTB33 GTRD no Lung (A549) 108357535
chr19 2065049 2065586 ZNF143 GTRD no Epithelial (MCF-7) 108357546
Genes associated with rs116746581[chr19:2065553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More