EnhancerDB
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  3. rs116800261[chr12:109003563]
Enhancers that have rs116800261[chr12:109003563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr12 109003329 109003729 vista14818
VISTA
Transcript factors that have rs116800261[chr12:109003563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109003199 109003719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570960
chr12 109003199 109003719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056856
chr12 109003201 109003797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570961
chr12 109003201 109003797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056857
chr12 109003294 109003629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570967
chr12 109003294 109003629 TCF3 UCSC Txn Factor no Conserved 108056864
chr12 109003294 109003629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056865
chr12 109003300 109003618 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570968
chr12 109003300 109003618 TCF12 UCSC Txn Factor no Conserved 108056866
chr12 109003300 109003618 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056867
chr12 109003361 109003651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570969
chr12 109003361 109003651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056868
chr12 109003415 109003619 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108056871
chr12 109003480 109003696 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108056873
Genes associated with rs116800261[chr12:109003563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More