EnhancerDB
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  3. rs116802873[chr17:62676732]
Enhancers that have rs116802873[chr17:62676732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs116802873[chr17:62676732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 21778864
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 108282545
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 21778870
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 108282546
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 21778871
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 108282547
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 21778872
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 108282548
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 21778873
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 108282549
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 21778877
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 108282551
chr17 62675780 62676776 TCF7L2 GTRD no Colon (HCT116) 21778885
chr17 62675780 62676776 TCF7L2 GTRD no Colon (HCT116) 108282558
chr17 62676718 62676738 RREB1 JASPAR yes 55310489
chr17 62676725 62676740 FOXP1 JASPAR yes 55310490
chr17 62676726 62676737 FOXP2 JASPAR yes 55310491
chr17 62676726 62676741 STAT2 JASPAR yes 55310492
chr17 62676727 62676742 FOXP1 JASPAR yes 55310493
chr17 62676729 62676744 FOXP1 JASPAR yes 55310494
chr17 62676730 62676745 FOXP1 JASPAR yes 55310495
chr17 62676732 62676747 FOXP1 JASPAR yes 55310496
chr17 62676732 62676747 MEF2C JASPAR yes 55310497
Genes associated with rs116802873[chr17:62676732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More