EnhancerDB
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  3. rs116835663[chr6:43781140]
Enhancers that have rs116835663[chr6:43781140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116835663[chr6:43781140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43781139 43781151 PKNOX1 JASPAR yes 101788064
chr6 43781139 43781151 PKNOX2 JASPAR yes 101788065
chr6 43781139 43781151 TGIF1 JASPAR yes 101788066
chr6 43781139 43781151 TGIF2 JASPAR yes 101788067
chr6 43781140 43781149 SNAI2 JASPAR yes 101788068
chr6 43781140 43781150 ID4 JASPAR yes 101788069
Genes associated with rs116835663[chr6:43781140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More