EnhancerDB
  1. Home
  2. SNP
  3. rs116848594[chr17:78697564]
Enhancers that have rs116848594[chr17:78697564]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78688225 78715375 enh4635
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Thymus Stomach
Transcript factors that have rs116848594[chr17:78697564]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78697550 78697564 ONECUT1 JASPAR yes 56271829
chr17 78697550 78697564 ONECUT2 JASPAR yes 56271830
chr17 78697550 78697564 ONECUT3 JASPAR yes 56271831
chr17 78697554 78697568 POU1F1 JASPAR yes 56271834
chr17 78697555 78697567 POU3F2 JASPAR yes 56271835
chr17 78697556 78697568 POU2F1 JASPAR yes 56271836
chr17 78697563 78697568 GATA1 TRANSFAC yes 56271837
Genes associated with rs116848594[chr17:78697564], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More