EnhancerDB
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  3. rs116850868[chr12:52556493]
Enhancers that have rs116850868[chr12:52556493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116850868[chr12:52556493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52556211 52556776 TCF7L2 GTRD no Colon (HCT116) 21546539
chr12 52556226 52556716 TCF7L2 GTRD no Colon (HCT116) 21546540
Genes associated with rs116850868[chr12:52556493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 51487446 51566926 - TFCP2 ENSG00000135457.5 51566926 989567 Adrenal 0.347821 12061