EnhancerDB
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  3. rs116907825[chr1:204570576]
Enhancers that have rs116907825[chr1:204570576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204568173 204574495 enh50146
Neural Stem Cells (H9) Large Intestine
Transcript factors that have rs116907825[chr1:204570576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204570571 204570581 EMX1 JASPAR yes 34714934
chr1 204570571 204570581 GSX2 JASPAR yes 34714935
chr1 204570571 204570581 HOXB2 JASPAR yes 34714936
chr1 204570571 204570581 MEOX2 JASPAR yes 34714937
chr1 204570571 204570581 MNX1 JASPAR yes 34714938
chr1 204570572 204570580 LMX1A JASPAR yes 34714939
chr1 204570572 204570580 LMX1B JASPAR yes 34714940
chr1 204570572 204570580 NKX6-1 JASPAR yes 34714941
chr1 204570572 204570580 NKX6-2 JASPAR yes 34714942
chr1 204570572 204570580 PDX1 JASPAR yes 34714943
chr1 204570572 204570580 VAX1 JASPAR yes 34714944
chr1 204570572 204570580 VAX2 JASPAR yes 34714945
chr1 204570572 204570580 VSX1 JASPAR yes 34714946
Genes associated with rs116907825[chr1:204570576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More