EnhancerDB
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  3. rs116987879[chr16:88560571]
Enhancers that have rs116987879[chr16:88560571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs116987879[chr16:88560571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88558694 88562778 ZNF274 GTRD no Bone Marrow (K562) 21736624
chr16 88558694 88562778 ZNF274 GTRD no Bone Marrow (K562) 108222539
chr16 88559578 88562000 ZNF274 GTRD no Liver (HepG2) 21736625
chr16 88559578 88562000 ZNF274 GTRD no Liver (HepG2) 108222540
chr16 88559635 88562500 ZNF274 GTRD no Bone Marrow (K562) 21736626
chr16 88559635 88562500 ZNF274 GTRD no Bone Marrow (K562) 108222541
chr16 88559752 88562799 ZNF143 GTRD no Epithelial (MCF-7) 21736627
chr16 88559752 88562799 ZNF143 GTRD no Epithelial (MCF-7) 108222542
chr16 88559771 88561439 ZNF143 GTRD no Epithelial (MCF-7) 21736628
chr16 88559771 88561439 ZNF143 GTRD no Epithelial (MCF-7) 108222543
chr16 88559775 88562609 ZNF143 GTRD no Epithelial (MCF-7) 21736629
chr16 88559775 88562609 ZNF143 GTRD no Epithelial (MCF-7) 108222544
chr16 88559781 88561476 ZNF143 GTRD no Epithelial (MCF-7) 21736630
chr16 88559781 88561476 ZNF143 GTRD no Epithelial (MCF-7) 108222545
chr16 88559979 88562544 ZBTB33 GTRD no Lung (A549) 108222546
chr16 88559993 88561503 ZNF143 GTRD no Epithelial (MCF-7) 21736631
chr16 88559993 88561503 ZNF143 GTRD no Epithelial (MCF-7) 108222547
chr16 88560022 88562827 TCF7L2 GTRD no Colon (HCT116) 21736632
chr16 88560022 88562827 TCF7L2 GTRD no Colon (HCT116) 108222548
chr16 88560055 88561158 ZNF274 GTRD no Bone Marrow (K562) 21736633
chr16 88560055 88561158 ZNF274 GTRD no Bone Marrow (K562) 108222549
chr16 88560056 88561452 ZNF143 GTRD no Epithelial (MCF-7) 21736634
chr16 88560056 88561452 ZNF143 GTRD no Epithelial (MCF-7) 108222550
chr16 88560065 88562507 ZNF143 GTRD no Epithelial (MCF-7) 21736635
chr16 88560065 88562507 ZNF143 GTRD no Epithelial (MCF-7) 108222551
chr16 88560105 88561883 ZNF274 GTRD no Cervix (HeLa-S3) 108222552
chr16 88560109 88561413 TCF7L2 GTRD no Colon (HCT116) 21736636
chr16 88560109 88561413 TCF7L2 GTRD no Colon (HCT116) 108222553
chr16 88560140 88562364 ZNF274 GTRD no Liver (HepG2) 21736637
chr16 88560140 88562364 ZNF274 GTRD no Liver (HepG2) 108222554
chr16 88560156 88562789 ZNF274 GTRD no Bone Marrow (K562) 21736638
chr16 88560156 88562789 ZNF274 GTRD no Bone Marrow (K562) 108222555
chr16 88560178 88562983 ZNF274 GTRD no Bone Marrow (K562) 21736639
chr16 88560178 88562983 ZNF274 GTRD no Bone Marrow (K562) 108222556
chr16 88560234 88561526 ZNF274 GTRD no Blood (GM12878) 108222557
chr16 88560261 88561980 ZBTB33 GTRD no Brain (SK-N-SH) 21736640
chr16 88560261 88561980 ZBTB33 GTRD no Brain (SK-N-SH) 108222558
chr16 88560287 88561382 TCF7L2 GTRD no Colon (HCT116) 21736641
chr16 88560287 88561382 TCF7L2 GTRD no Colon (HCT116) 108222559
chr16 88560290 88561309 TCF7L2 GTRD no Colon (HCT116) 21736642
chr16 88560290 88561309 TCF7L2 GTRD no Colon (HCT116) 108222560
chr16 88560338 88561375 ZNF274 GTRD no Bone Marrow (K562) 21736643
chr16 88560338 88561375 ZNF274 GTRD no Bone Marrow (K562) 108222561
chr16 88560370 88561270 ZBTB33 GTRD no Lung (A549) 108222562
chr16 88560378 88561420 ZNF274 GTRD no Blood (GM12878) 108222563
chr16 88560390 88561624 ZNF274 GTRD no Bone Marrow (K562) 21736644
chr16 88560390 88561624 ZNF274 GTRD no Bone Marrow (K562) 108222564
chr16 88560411 88561629 ZNF143 GTRD no Epithelial (MCF-7) 21736645
chr16 88560411 88561629 ZNF143 GTRD no Epithelial (MCF-7) 108222565
chr16 88560420 88561044 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736646
chr16 88560420 88561044 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222566
chr16 88560420 88561640 ZNF274 GTRD no Cervix (HeLa-S3) 108222567
chr16 88560458 88561582 ZNF274 GTRD no Bone Marrow (K562) 21736647
chr16 88560458 88561582 ZNF274 GTRD no Bone Marrow (K562) 108222568
chr16 88560470 88560906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736648
chr16 88560470 88560906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222569
chr16 88560491 88561561 ZNF274 GTRD no Blood (GM12878) 108222570
chr16 88560497 88561406 TCF7L2 GTRD no Colon (HCT116) 21736649
chr16 88560497 88561406 TCF7L2 GTRD no Colon (HCT116) 108222571
chr16 88560528 88561095 TCF7L2 GTRD no Colon (HCT116) 21736650
chr16 88560528 88561095 TCF7L2 GTRD no Colon (HCT116) 108222572
chr16 88560532 88561712 ZNF274 GTRD no Bone Marrow (K562) 21736651
chr16 88560532 88561712 ZNF274 GTRD no Bone Marrow (K562) 108222573
chr16 88560541 88561284 ZNF274 GTRD no Liver (HepG2) 21736652
chr16 88560541 88561284 ZNF274 GTRD no Liver (HepG2) 108222574
chr16 88560542 88561728 ZNF274 GTRD no Bone Marrow (K562) 21736653
chr16 88560542 88561728 ZNF274 GTRD no Bone Marrow (K562) 108222575
chr16 88560555 88561143 ZNF274 GTRD no Bone Marrow (K562) 21736654
chr16 88560555 88561143 ZNF274 GTRD no Bone Marrow (K562) 108222576
chr16 88560561 88561289 ZNF143 GTRD no Epithelial (MCF-7) 21736655
chr16 88560561 88561289 ZNF143 GTRD no Epithelial (MCF-7) 108222577
chr16 88560566 88561372 ZNF143 GTRD no Epithelial (MCF-7) 21736656
chr16 88560566 88561372 ZNF143 GTRD no Epithelial (MCF-7) 108222578
chr16 88560567 88561456 ZNF274 GTRD no Liver (HepG2) 21736657
chr16 88560567 88561456 ZNF274 GTRD no Liver (HepG2) 108222579
Genes associated with rs116987879[chr16:88560571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More