EnhancerDB
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  3. rs117042553[chr19:7402224]
Enhancers that have rs117042553[chr19:7402224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7396146 7408393 enh4994
Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs117042553[chr19:7402224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7401978 7402911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21846479
chr19 7401978 7402911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108380962
chr19 7402161 7402661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21846480
chr19 7402214 7402227 EOMES JASPAR yes 112318369
chr19 7402216 7402226 TBR1 JASPAR yes 112318371
chr19 7402216 7402227 TBX2 JASPAR yes 112318372
chr19 7402217 7402227 TBX21 JASPAR yes 112318373
chr19 7402218 7402226 MGA JASPAR yes 112318374
chr19 7402218 7402226 TBX15 JASPAR yes 112318375
chr19 7402218 7402226 TBX1 JASPAR yes 112318376
chr19 7402218 7402226 TBX4 JASPAR yes 112318377
chr19 7402218 7402226 TBX5 JASPAR yes 112318378
chr19 7402218 7402227 ZEB1 JASPAR yes 112318379
chr19 7402218 7402230 PKNOX1 JASPAR yes 112318380
chr19 7402218 7402230 PKNOX2 JASPAR yes 112318381
chr19 7402218 7402230 TGIF1 JASPAR yes 112318382
chr19 7402218 7402230 TGIF2 JASPAR yes 112318383
chr19 7402219 7402229 ID4 JASPAR yes 112318384
chr19 7402219 7402229 NHLH1 JASPAR yes 112318385
chr19 7402219 7402229 TCF3 JASPAR yes 112318386
chr19 7402219 7402229 TCF4 JASPAR yes 112318387
chr19 7402220 7402229 SNAI2 JASPAR yes 112318388
chr19 7402221 7402226 USF2 TRANSFAC yes 112318389
chr19 7402223 7402235 YY1 JASPAR yes 112318390
Genes associated with rs117042553[chr19:7402224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More