EnhancerDB
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  3. rs117057525[chr17:46534998]
Enhancers that have rs117057525[chr17:46534998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46526985 46553325 enh4455
Prostate (PC-3) Large Intestine Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus
Transcript factors that have rs117057525[chr17:46534998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46534658 46535093 TCF7L2 GTRD no Colon (HCT116) 21767606
chr17 46534665 46535125 TCF7L2 GTRD no Colon (HCT116) 21767607
chr17 46534673 46535079 TCF7L2 GTRD no Colon (HCT116) 21767608
chr17 46534682 46535144 TCF7L2 GTRD no Colon (HCT116) 21767609
chr17 46534688 46535085 TCF7L2 GTRD no Colon (HCT116) 21767612
chr17 46534995 46535005 TBX21 JASPAR yes 54584361
chr17 46534995 46535006 TBX20 JASPAR yes 54584362
chr17 46534995 46535006 TBX2 JASPAR yes 54584363
chr17 46534995 46535008 EOMES JASPAR yes 54584364
chr17 46534996 46535004 MGA JASPAR yes 54584365
chr17 46534996 46535004 TBX15 JASPAR yes 54584366
chr17 46534996 46535004 TBX1 JASPAR yes 54584367
chr17 46534996 46535004 TBX4 JASPAR yes 54584368
chr17 46534996 46535004 TBX5 JASPAR yes 54584369
chr17 46534996 46535006 TBR1 JASPAR yes 54584370
chr17 46534997 46535009 IRF1 JASPAR yes 54584371
Genes associated with rs117057525[chr17:46534998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More