EnhancerDB
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  3. rs117205540[chr6:42340330]
Enhancers that have rs117205540[chr6:42340330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs117205540[chr6:42340330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42340320 42340333 EOMES JASPAR yes 101713987
chr6 42340322 42340332 TBR1 JASPAR yes 101713988
chr6 42340322 42340333 TBX2 JASPAR yes 101713989
chr6 42340323 42340333 TBX21 JASPAR yes 101713990
chr6 42340324 42340332 TBX15 JASPAR yes 101713991
chr6 42340324 42340332 TBX4 JASPAR yes 101713992
Genes associated with rs117205540[chr6:42340330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More