EnhancerDB
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  3. rs117207417[chr1:201271728]
Enhancers that have rs117207417[chr1:201271728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201263092 201282279 enh12518
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Thyroid Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs117207417[chr1:201271728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201271720 201271735 PRDM1 JASPAR yes 34488526
chr1 201271725 201271740 TFAP2A JASPAR yes 34488527
chr1 201271725 201271740 TFAP2C JASPAR yes 34488528
chr1 201271728 201271739 EBF1 JASPAR yes 34488529
chr1 201271728 201271740 TFAP2A JASPAR yes 34488530
chr1 201271728 201271740 TFAP2B JASPAR yes 34488531
chr1 201271728 201271740 TFAP2C JASPAR yes 34488532
chr1 201271728 201271742 PLAG1 JASPAR yes 34488533
Genes associated with rs117207417[chr1:201271728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More