EnhancerDB
  1. Home
  2. SNP
  3. rs117241290[chr17:55436052]
Enhancers that have rs117241290[chr17:55436052]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55429945 55439655 enh4485
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs117241290[chr17:55436052]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55435209 55437247 AR GTRD no Prostate (PC-3) 21773411
chr17 55435209 55437247 AR GTRD no Prostate (PC-3) 108273842
chr17 55436052 55436059 NKX3-1 JASPAR yes 54946018
Genes associated with rs117241290[chr17:55436052], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More