EnhancerDB
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Enhancers that have rs117284146[chr18:56722091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56713905 56728615 enh52777
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Pancreas (Panc1) Pancreas Spleen Kidney
Transcript factors that have rs117284146[chr18:56722091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56721964 56722560 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21824508
chr18 56722030 56722366 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21824509
chr18 56722081 56722094 POU3F3 JASPAR yes 111004709
chr18 56722081 56722095 POU1F1 JASPAR yes 111004710
chr18 56722082 56722094 POU3F1 JASPAR yes 111004711
chr18 56722082 56722094 POU3F2 JASPAR yes 111004712
chr18 56722085 56722100 HNF1A JASPAR yes 111004713
chr18 56722086 56722096 ESX1 JASPAR yes 111004714
chr18 56722086 56722096 GSX2 JASPAR yes 111004715
chr18 56722086 56722096 HOXB2 JASPAR yes 111004716
chr18 56722086 56722096 HOXB3 JASPAR yes 111004717
chr18 56722086 56722096 LHX6 JASPAR yes 111004718
chr18 56722086 56722096 MEOX2 JASPAR yes 111004719
chr18 56722086 56722096 MNX1 JASPAR yes 111004720
chr18 56722086 56722096 POU6F1 JASPAR yes 111004721
chr18 56722086 56722096 RAX JASPAR yes 111004722
chr18 56722086 56722098 HNF1B JASPAR yes 111004723
chr18 56722086 56722099 HNF1B JASPAR yes 111004724
chr18 56722087 56722095 LMX1A JASPAR yes 111004725
chr18 56722087 56722095 LMX1B JASPAR yes 111004726
chr18 56722087 56722095 NKX6-1 JASPAR yes 111004727
chr18 56722087 56722095 NKX6-2 JASPAR yes 111004728
chr18 56722087 56722095 VAX1 JASPAR yes 111004729
chr18 56722087 56722095 VAX2 JASPAR yes 111004730
chr18 56722087 56722095 VSX1 JASPAR yes 111004731
chr18 56722087 56722095 VSX2 JASPAR yes 111004732
Genes associated with rs117284146[chr18:56722091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More